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Complete genome sequence of the gliding freshwater bacterium Fluviicola taffensis type strain (RW262T)...

Publication Type
Journal
Journal Name
Standards in Genomic Sciences
Publication Date
Page Numbers
21 to 29
Volume
5
Issue
1

Fluviicola taffensis O'Sullivan et al. 2005 belongs to the monotypic genus Fluviicola within
the family Cryomorphaceae. The species is of interest because of its isolated phylogenetic location in the genome-sequenced fraction of the tree of life. Strain RW262
T
forms a monophyletic lineage with uncultivated bacteria represented in freshwater 16S rRNA gene libraries. A
similar phylogenetic differentiation occurs between freshwater and marine bacteria in the
family Flavobacteriaceae, a sister family to Cryomorphaceae. Most remarkable is the inability
of this freshwater bacterium to grow in the presence of Na
+
ions. All other genera in the family Cryomorphaceae are from marine habitats and have an absolute requirement for Na
+
ions
or natural sea water. F. taffensis is the first member of the family Cryomorphaceae with a
completely sequenced and publicly available genome. The 4,633,577 bp long genome with
its 4,082 protein-coding and 49 RNA genes is a part of the Genomic Encyclopedia of Bacteria
and Archaea project.